Detection and characterization of pancreatic lesions with 3D CT data using an automated deep learning-based solution.
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Goubalan Segbedji, Della Corte Angelo, Laurent Valerie, De Craene Mathieu, Nempont Olivier, Lobantsev Artem, Popoff Alexandre, Bouyrie Mathieu, Rode Agnès, Aouad Théodore, Levant Paul, Brillat-Savarin Nina, Gaillot Pénélope, Hoeffel Christine, Frampas Eric, Barat Maxime, Russo Roberta, Wagner Mathilde, Zappa Magaly, Ernst Olivier, Delagnes Anais, Fillias Quentin, Dawi Lama, Savoye-Collet Céline, Copin Pauline, Calame Paul, Reizine Edouard, Luciani Alain, Bellin Marie-France, Talbot Hugues, Lassau Nathalie, Boussel Loïc
Аннотация
MATERIALS AND METHODS: A dataset of 1,037 portal-phase CT scans was compiled from 18 institutions. The dataset was divided into a training set (N = 732) and a test set (N = 305), which was further divided into an internal validation test set (N = 139) and an external validation test set (N = 166). After segmentation using the TotalSegmentator algorithm, the pancreas was isolated from each CT scan. A DL model combining TotalSegmentator's pre-trained encoder and nnUNet decoder layers was developed to classify pancreas lesions. Ten-fold cross-validation was applied, and model performance was assessed using precision, recall, area under the curve (AUC) and a final score (FS) representing a weighted average of the previous three metrics. The final prediction combined the outputs of ten models.
RESULTS: Across all validation datasets (139 and 166 patients, respectively, in the internal and external dataset), precision and recall were 0.57 and 0.63, respectively, while AUC was 0.84. In the external validation dataset, malignant lesions were detected with an AUC of 0.97. The model achieved an FS of 0.72 in both internal and external validation datasets, indicating consistent performance across datasets.
CONCLUSION: This study demonstrated the feasibility of using a DL algorithm for automated pancreas lesion classification in CT scans. The model showed strong performance, particularly in detecting malignant lesions. Further research is needed to assess the model's clinical applicability and performance in real-world settings.