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DOI 10.1109/ojemb.2024.3407351

Медицинская библиотека · IEEE open journal of engineering in medicine and biology · 2024

PseudoCell: Hard Negative Mining as Pseudo Labeling for Deep Learning-Based Centroblast Cell Detection.

Seesawad Narongrid, Ittichaiwong Piyalitt, Sudhawiyangkul Thapanun, Sawangjai Phattarapong, Thuwajit Peti, Boonsakan Paisarn, Sripodok Supasan, Veerakanjana Kanyakorn, Charngkaew Komgrid, Pongpaibul Ananya, Angkathunyakul Napat, Hnoohom Narit, Yuenyong Sumeth, Thuwajit Chanitra, Wilaiprasitporn Theerawit

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Аннотация

Background

Deep learning models for patch classification in whole-slide images (WSIs) have shown promise in assisting follicular lymphoma grading. However, these models often require pathologists to identify centroblasts and manually provide refined labels for model optimization.

Objective

To address this limitation, we propose PseudoCell, an object detection framework for automated centroblast detection in WSI, eliminating the need for extensive pathologist's refined labels.

Methods

PseudoCell leverages a combination of pathologist-provided centroblast labels and pseudo-negative labels generated from undersampled false-positive predictions based on cell morphology features. This approach reduces the reliance on time-consuming manual annotations.

Results

Our framework significantly reduces the workload for pathologists by accurately identifying and narrowing down areas of interest containing centroblasts. Depending on the confidence threshold, PseudoCell can eliminate 58.18-99.35% of irrelevant tissue areas on WSI, streamlining the diagnostic process.

Conclusion

This study presents PseudoCell as a practical and efficient prescreening method for centroblast detection, eliminating the need for refined labels from pathologists. The discussion section provides detailed guidance for implementing PseudoCell in clinical practice.

Для цитирования: Seesawad Narongrid, Ittichaiwong Piyalitt, Sudhawiyangkul Thapanun, Sawangjai Phattarapong, Thuwajit Peti, Boonsakan Paisarn, Sripodok Supasan, Veerakanjana Kanyakorn, Charngkaew Komgrid, Pongpaibul Ananya, Angkathunyakul Napat, Hnoohom Narit, Yuenyong Sumeth, Thuwajit Chanitra, Wilaiprasitporn Theerawit. PseudoCell: Hard Negative Mining as Pseudo Labeling for Deep Learning-Based Centroblast Cell Detection.. IEEE open journal of engineering in medicine and biology. 2024. DOI: 10.1109/ojemb.2024.3407351.
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