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DOI 10.3390/jpm13060977

Медицинская библиотека · Journal of personalized medicine · 2023

Development and Replication of a Genome-Wide Polygenic Risk Score for Chronic Back Pain.

Tsepilov Yakov A, Elgaeva Elizaveta E, Nostaeva Arina V, Compte Roger, Kuznetsov Ivan A, Karssen Lennart C, Freidin Maxim B, Suri Pradeep, Williams Frances M K, Aulchenko Yurii S

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Аннотация

Chronic back pain (CBP) is a complex heritable trait and a major cause of disability worldwide. We developed and validated a genome-wide polygenic risk score (PRS) for CBP using a large-scale GWAS based on UK Biobank participants of European ancestry (N = 265,000). The PRS showed poor overall predictive ability (AUC = 0.56 and OR = 1.24 per SD, 95% CI: 1.22-1.26), but individuals from the 99th percentile of PRS distribution had a nearly two-fold increased risk of CBP (OR = 1.82, 95% CI: 1.60-2.06). We validated the PRS on an independent TwinsUK sample, obtaining a similar magnitude of effect. The PRS was significantly associated with various ICD-10 and OPCS-4 diagnostic codes, including chronic ischemic heart disease (OR = 1.1, p-value = 4.8 × 10-15), obesity, metabolism-related traits, spine disorders, disc degeneration, and arthritis-related disorders. PRS and environment interaction analysis with twelve known CBP risk factors revealed no significant results, suggesting that the magnitude of G × E interactions with studied factors is small. The limited predictive ability of the PRS that we developed is likely explained by the complexity, heterogeneity, and polygenicity of CBP, for which sample sizes of a few hundred thousand are insufficient to estimate small genetic effects robustly.

Для цитирования: Tsepilov Yakov A, Elgaeva Elizaveta E, Nostaeva Arina V, Compte Roger, Kuznetsov Ivan A, Karssen Lennart C, Freidin Maxim B, Suri Pradeep, Williams Frances M K, Aulchenko Yurii S. Development and Replication of a Genome-Wide Polygenic Risk Score for Chronic Back Pain.. Journal of personalized medicine. 2023. DOI: 10.3390/jpm13060977.
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