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DOI 10.1371/journal.pcbi.1012370

Медицинская библиотека · PLoS computational biology · 2024

Applying Super-Resolution and Tomography Concepts to Identify Receptive Field Subunits in the Retina.

Krüppel Steffen, Khani Mohammad H, Schreyer Helene M, Sridhar Shashwat, Ramakrishna Varsha, Zapp Sören J, Mietsch Matthias, Karamanlis Dimokratis, Gollisch Tim

СтатьяПоддержка исследования: вне правительства СШАПеревод в очереди

Аннотация

Spatially nonlinear stimulus integration by retinal ganglion cells lies at the heart of various computations performed by the retina. It arises from the nonlinear transmission of signals that ganglion cells receive from bipolar cells, which thereby constitute functional subunits within a ganglion cell's receptive field. Inferring these subunits from recorded ganglion cell activity promises a new avenue for studying the functional architecture of the retina. This calls for efficient methods, which leave sufficient experimental time to leverage the acquired knowledge for further investigating identified subunits. Here, we combine concepts from super-resolution microscopy and computed tomography and introduce super-resolved tomographic reconstruction (STR) as a technique to efficiently stimulate and locate receptive field subunits. Simulations demonstrate that this approach can reliably identify subunits across a wide range of model variations, and application in recordings of primate parasol ganglion cells validates the experimental feasibility. STR can potentially reveal comprehensive subunit layouts within only a few tens of minutes of recording time, making it ideal for online analysis and closed-loop investigations of receptive field substructure in retina recordings.

Для цитирования: Krüppel Steffen, Khani Mohammad H, Schreyer Helene M, Sridhar Shashwat, Ramakrishna Varsha, Zapp Sören J, Mietsch Matthias, Karamanlis Dimokratis, Gollisch Tim. Applying Super-Resolution and Tomography Concepts to Identify Receptive Field Subunits in the Retina.. PLoS computational biology. 2024. DOI: 10.1371/journal.pcbi.1012370.

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