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DOI 10.1038/s41586-019-1765-3

Медицинская библиотека · Nature · 2019

Genetic predisposition to mosaic Y chromosome loss in blood.

Thompson Deborah J, Genovese Giulio, Halvardson Jonatan, Ulirsch Jacob C, Wright Daniel J, Terao Chikashi, Davidsson Olafur B, Day Felix R, Sulem Patrick, Jiang Yunxuan, Danielsson Marcus, Davies Hanna, Dennis Joe, Dunlop Malcolm G, Easton Douglas F, Fisher Victoria A, Zink Florian, Houlston Richard S, Ingelsson Martin, Kar Siddhartha, Kerrison Nicola D, Kinnersley Ben, Kristjansson Ragnar P, Law Philip J, Li Rong, Loveday Chey, Mattisson Jonas, McCarroll Steven A, Murakami Yoshinori, Murray Anna, Olszewski Pawel, Rychlicka-Buniowska Edyta, Scott Robert A, Thorsteinsdottir Unnur, Tomlinson Ian, Moghadam Behrooz Torabi, Turnbull Clare, Wareham Nicholas J, Gudbjartsson Daniel F, International Lung Cancer Consortium (INTEGRAL-ILCCO), Breast Cancer Association Consortium, Consortium of Investigators of Modifiers of BRCA1/2, Endometrial Cancer Association Consortium, Ovarian Cancer Association Consortium, Prostate Cancer Association Group to Investigate Cancer Associated Alterations in the Genome (PRACTICAL) Consortium, Kidney Cancer GWAS Meta-Analysis Project, eQTLGen Consortium, Biobank-based Integrative Omics Study (BIOS) Consortium, 23andMe Research Team, Kamatani Yoichiro, Hoffmann Eva R, Jackson Steve P, Stefansson Kari, Auton Adam, Ong Ken K, Machiela Mitchell J, Loh Po-Ru, Dumanski Jan P, Chanock Stephen J, Forsberg Lars A, Perry John R B

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Аннотация

Mosaic loss of chromosome Y (LOY) in circulating white blood cells is the most common form of clonal mosaicism1-5, yet our knowledge of the causes and consequences of this is limited. Here, using a computational approach, we estimate that 20% of the male population represented in the UK Biobank study (n = 205,011) has detectable LOY. We identify 156 autosomal genetic determinants of LOY, which we replicate in 757,114 men of European and Japanese ancestry. These loci highlight genes that are involved in cell-cycle regulation and cancer susceptibility, as well as somatic drivers of tumour growth and targets of cancer therapy. We demonstrate that genetic susceptibility to LOY is associated with non-haematological effects on health in both men and women, which supports the hypothesis that clonal haematopoiesis is a biomarker of genomic instability in other tissues. Single-cell RNA sequencing identifies dysregulated expression of autosomal genes in leukocytes with LOY and provides insights into why clonal expansion of these cells may occur. Collectively, these data highlight the value of studying clonal mosaicism to uncover fundamental mechanisms that underlie cancer and other ageing-related diseases.

Для цитирования: Thompson Deborah J, Genovese Giulio, Halvardson Jonatan, Ulirsch Jacob C, Wright Daniel J, Terao Chikashi, Davidsson Olafur B, Day Felix R, Sulem Patrick, Jiang Yunxuan, Danielsson Marcus, Davies Hanna, Dennis Joe, Dunlop Malcolm G, Easton Douglas F, Fisher Victoria A, Zink Florian, Houlston Richard S, Ingelsson Martin, Kar Siddhartha, Kerrison Nicola D, Kinnersley Ben, Kristjansson Ragnar P, Law Philip J, Li Rong, Loveday Chey, Mattisson Jonas, McCarroll Steven A, Murakami Yoshinori, Murray Anna, Olszewski Pawel, Rychlicka-Buniowska Edyta, Scott Robert A, Thorsteinsdottir Unnur, Tomlinson Ian, Moghadam Behrooz Torabi, Turnbull Clare, Wareham Nicholas J, Gudbjartsson Daniel F, International Lung Cancer Consortium (INTEGRAL-ILCCO), Breast Cancer Association Consortium, Consortium of Investigators of Modifiers of BRCA1/2, Endometrial Cancer Association Consortium, Ovarian Cancer Association Consortium, Prostate Cancer Association Group to Investigate Cancer Associated Alterations in the Genome (PRACTICAL) Consortium, Kidney Cancer GWAS Meta-Analysis Project, eQTLGen Consortium, Biobank-based Integrative Omics Study (BIOS) Consortium, 23andMe Research Team, Kamatani Yoichiro, Hoffmann Eva R, Jackson Steve P, Stefansson Kari, Auton Adam, Ong Ken K, Machiela Mitchell J, Loh Po-Ru, Dumanski Jan P, Chanock Stephen J, Forsberg Lars A, Perry John R B. Genetic predisposition to mosaic Y chromosome loss in blood.. Nature. 2019. DOI: 10.1038/s41586-019-1765-3.

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