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DOI 10.3389/fgene.2025.1610026

Медицинская библиотека · Frontiers in genetics · 2025

Get ready for short tandem repeats analysis using long reads-the challenges and the state of the art.

Chaushevska Marija, Alapont-Celaya Karmele, Schack Anne Kristine, Krych Lukasz, Garrido Navas M Carmen, Krithara Anastasia, Madjarov Gjorgji

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Аннотация

OBJECTIVE

To examine the application of artificial intelligence (AI) in pharmacovigilance across the Asia-Pacific and identify reported methodological implementation challenges.

METHODS

MEDLINE, Scopus, and Google Scholar were searched using terms related to artificial intelligence, computational signal detection, pharmacovigilance, and Asia-Pacific countries. Peer-reviewed original studies published in English were included. PRISMA 2020 guideline was followed.

RESULTS

We included 64 studies in 14 countries primarily focused on 1) Adverse Drug Reaction (ADR) identification, 2) ADR prediction and risk factor modelling, 3) Drug safety, monitoring, and evaluation, 4) Predictive modelling, and 5) Data information management. Machine Learning (ML) techniques were the most commonly applied AI methods in pharmacovigilance, followed by natural language processing, deep learning, neural networks, and symbolic and explainable AI. Disproportionality analysis methods were also commonly used across studies. Some challenges reported were relevant to data quality issues, generalizability, clinical workflow integration, implementation technicalities, and cultural barriers.

CONCLUSION

To overcome the challenges of AI application in the Asia-Pacific, a tiered implementation strategy can be employed through establishing a regional collaboration framework and taking into account disparities in technological maturity across countries.

Для цитирования: Chaushevska Marija, Alapont-Celaya Karmele, Schack Anne Kristine, Krych Lukasz, Garrido Navas M Carmen, Krithara Anastasia, Madjarov Gjorgji. Get ready for short tandem repeats analysis using long reads-the challenges and the state of the art.. Frontiers in genetics. 2025. DOI: 10.3389/fgene.2025.1610026.
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