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DOI 10.1164/rccm.202307-1129oc

Медицинская библиотека · American journal of respiratory and critical care medicine · 2024

Proteomic Biomarkers of Quantitative Interstitial Abnormalities in COPDGene and CARDIA Lung Study.

Choi Bina, Liu Gabrielle Y, Sheng Quanhu, Amancherla Kaushik, Perry Andrew, Huang Xiaoning, San José Estépar Ruben, Ash Samuel Y, Guan Weihua, Jacobs David R, Martinez Fernando J, Rosas Ivan O, Bowler Russell P, Kropski Jonathan A, Banovich Nicholas E, Khan Sadiya S, San José Estépar Raúl, Shah Ravi, Thyagarajan Bharat, Kalhan Ravi, Washko George R

СтатьяПоддержка NIH: внешняя программаПоддержка исследования: вне правительства СШАМногоцентровое исследованиеПеревод в очереди

Аннотация

Rationale: Quantitative interstitial abnormalities (QIAs) are early measures of lung injury automatically detected on chest computed tomography scans. QIAs are associated with impaired respiratory health and share features with advanced lung diseases, but their biological underpinnings are not well understood.

Objectives

To identify novel protein biomarkers of QIAs using high-throughput plasma proteomic panels within two multicenter cohorts.

Methods

We measured the plasma proteomics of 4,383 participants in an older, ever-smoker cohort (COPDGene [Genetic Epidemiology of Chronic Obstructive Pulmonary Disease]) and 2,925 participants in a younger population cohort (CARDIA [Coronary Artery Disease Risk in Young Adults]) using the SomaLogic SomaScan assays. We measured QIAs using a local density histogram method. We assessed the associations between proteomic biomarker concentrations and QIAs using multivariable linear regression models adjusted for age, sex, body mass index, smoking status, and study center (Benjamini-Hochberg false discovery rate-corrected P ⩽ 0.05). Measurements and Main

Results

In total, 852 proteins were significantly associated with QIAs in COPDGene and 185 in CARDIA. Of the 144 proteins that overlapped between COPDGene and CARDIA, all but one shared directionalities and magnitudes. These proteins were enriched for 49 Gene Ontology pathways, including biological processes in inflammatory response, cell adhesion, immune response, ERK1/2 regulation, and signaling; cellular components in extracellular regions; and molecular functions including calcium ion and heparin binding.

Conclusions

We identified the proteomic biomarkers of QIAs in an older, smoking population with a higher prevalence of pulmonary disease and in a younger, healthier community cohort. These proteomics features may be markers of early precursors of advanced lung diseases.

Для цитирования: Choi Bina, Liu Gabrielle Y, Sheng Quanhu, Amancherla Kaushik, Perry Andrew, Huang Xiaoning, San José Estépar Ruben, Ash Samuel Y, Guan Weihua, Jacobs David R, Martinez Fernando J, Rosas Ivan O, Bowler Russell P, Kropski Jonathan A, Banovich Nicholas E, Khan Sadiya S, San José Estépar Raúl, Shah Ravi, Thyagarajan Bharat, Kalhan Ravi, Washko George R. Proteomic Biomarkers of Quantitative Interstitial Abnormalities in COPDGene and CARDIA Lung Study.. American journal of respiratory and critical care medicine. 2024. DOI: 10.1164/rccm.202307-1129oc.

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