MedElevator Войти в исследования
← Поиск публикаций

DOI 10.1016/j.jmr.2024.107661

Медицинская библиотека · Journal of magnetic resonance (San Diego, Calif. : 1997) · 2024

A set of cross-correlated relaxation experiments to probe the correlation time of two different and complementary spin pairs.

Ceccolini Irene, Kauffmann Clemens, Holzinger Julian, Konrat Robert, Zawadzka-Kazimierczuk Anna

СтатьяПеревод в очереди

Аннотация

Intrinsically disordered proteins (IDPs) defy the conventional structure-function paradigm by lacking a well-defined tertiary structure and exhibiting inherent flexibility. This flexibility leads to distinctive spin relaxation modes, reflecting isolated and specific motions within individual peptide planes. In this work, we propose a new pulse sequence to measure the longitudinal 13C' CSA-13C'-13Cα DD CCR rate [Formula: see text] and present a novel 3D version of the transverse [Formula: see text] CCR rate, adopting the symmetrical reconversion approach. We combined these rates with the analogous ΓxyN/NH and ΓzN/NH CCR rates to derive residue-specific correlation times for both spin-pairs within the same peptide plane. The presented approach offers a straightforward and intuitive way to compare the correlation times of two different and complementary spin vectors, anticipated to be a valuable aid to determine IDPs backbone dihedral angles distributions. We performed the proposed experiments on two systems: a folded protein ubiquitin and Coturnix japonica osteopontin, a prototypical IDP. Comparative analyses of the results show that the correlation times of different residues vary more for IDPs than globular proteins, indicating that the dynamics of IDPs is largely heterogeneous and dominated by local fluctuations.

Для цитирования: Ceccolini Irene, Kauffmann Clemens, Holzinger Julian, Konrat Robert, Zawadzka-Kazimierczuk Anna. A set of cross-correlated relaxation experiments to probe the correlation time of two different and complementary spin pairs.. Journal of magnetic resonance (San Diego, Calif. : 1997). 2024. DOI: 10.1016/j.jmr.2024.107661.

Предметные рубрики MeSH

Подготовка и перевод публикации
Обработка статьи · этапы, ошибки и управление
Загрузка состояния…

История · было → стало

Состояние обновляется каждые 5 секунд, пока блок открыт. Процент показывается только там, где известен объём работы. Пауза останавливает продолжение этапа; текущий запрос к источнику может завершиться.

Тип публикации указан по данным источника. Уровень доказательности автоматически не присваивается.