Journal of chemical information and modeling · 2024
ACEGEN: Reinforcement Learning of Generative Chemical Agents for Drug Discovery.
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Bou Albert, Thomas Morgan, Dittert Sebastian, Navarro Carles, Majewski Maciej, Wang Ye, Patel Shivam, Tresadern Gary, Ahmad Mazen, Moens Vincent, Sherman Woody, Sciabola Simone, De Fabritiis Gianni
Аннотация
In recent years, reinforcement learning (RL) has emerged as a valuable tool in drug design, offering the potential to propose and optimize molecules with desired properties. However, striking a balance between capabilities, flexibility, reliability, and efficiency remains challenging due to the complexity of advanced RL algorithms and the significant reliance on specialized code. In this work, we introduce ACEGEN, a comprehensive and streamlined toolkit tailored for generative drug design, built using TorchRL, a modern RL library that offers thoroughly tested reusable components. We validate ACEGEN by benchmarking against other published generative modeling algorithms and show comparable or improved performance. We also show examples of ACEGEN applied in multiple drug discovery case studies. ACEGEN is accessible at https://github.com/acellera/acegen-open and available for use under the MIT license.