Local, national, and regional viral haemorrhagic fever pandemic potential in Africa: a multistage analysis.
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Pigott David M, Deshpande Aniruddha, Letourneau Ian, Morozoff Chloe, Reiner Robert C, Kraemer Moritz U G, Brent Shannon E, Bogoch Isaac I, Khan Kamran, Biehl Molly H, Burstein Roy, Earl Lucas, Fullman Nancy, Messina Jane P, Mylne Adrian Q N, Moyes Catherine L, Shearer Freya M, Bhatt Samir, Brady Oliver J, Gething Peter W, Weiss Daniel J, Tatem Andrew J, Caley Luke, De Groeve Tom, Vernaccini Luca, Golding Nick, Horby Peter, Kuhn Jens H, Laney Sandra J, Ng Edmond, Piot Peter, Sankoh Osman, Murray Christopher J L, Hay Simon I
Аннотация
METHODS: In this multistage analysis, we quantified three stages underlying the potential of widespread viral haemorrhagic fever epidemics. Environmental suitability maps were used to define stage 1, index-case potential, which assesses populations at risk of infection due to spillover from zoonotic hosts or vectors, identifying where index cases could present. Stage 2, outbreak potential, iterates upon an existing framework, the Index for Risk Management, to measure potential for secondary spread in people within specific communities. For stage 3, epidemic potential, we combined local and international scale connectivity assessments with stage 2 to evaluate possible spread of local outbreaks nationally, regionally, and internationally.
FINDINGS: We found epidemic potential to vary within Africa, with regions where viral haemorrhagic fever outbreaks have previously occurred (eg, western Africa) and areas currently considered non-endemic (eg, Cameroon and Ethiopia) both ranking highly. Tracking transitions between stages showed how an index case can escalate into a widespread epidemic in the absence of intervention (eg, Nigeria and Guinea). Our analysis showed Chad, Somalia, and South Sudan to be highly susceptible to any outbreak at subnational levels.
INTERPRETATION: Our analysis provides a unified assessment of potential epidemic trajectories, with the aim of allowing national and international agencies to pre-emptively evaluate needs and target resources. Within each country, our framework identifies at-risk subnational locations in which to improve surveillance, diagnostic capabilities, and health systems in parallel with the design of policies for optimal responses at each stage. In conjunction with pandemic preparedness activities, assessments such as ours can identify regions where needs and provisions do not align, and thus should be targeted for future strengthening and support.
FUNDING: Paul G Allen Family Foundation, Bill & Melinda Gates Foundation, Wellcome Trust, UK Department for International Development.