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DOI 10.1016/j.compbiomed.2023.106971

Медицинская библиотека · Computers in biology and medicine · 2023

Identification of core therapeutic targets for Monkeypox virus and repurposing potential of drugs against them: An in silico approach.

Sahu Anshuman, Gaur Mahendra, Mahanandia Nimai Charan, Subudhi Enketeswara, Swain Ranjit Prasad, Subudhi Bharat Bhusan

СтатьяПоддержка исследования: вне правительства СШАПеревод в очереди

Аннотация

Monkeypox virus (mpox virus) outbreak has rapidly spread to 82 non-endemic countries. Although it primarily causes skin lesions, secondary complications and high mortality (1-10%) in vulnerable populations have made it an emerging threat. Since there is no specific vaccine/antiviral, it is desirable to repurpose existing drugs against mpox virus. With little knowledge about the lifecycle of mpox virus, identifying potential inhibitors is a challenge. Nevertheless, the available genomes of mpox virus in public databases represent a goldmine of untapped possibilities to identify druggable targets for the structure-based identification of inhibitors. Leveraging this resource, we combined genomics and subtractive proteomics to identify highly druggable core proteins of mpox virus. This was followed by virtual screening to identify inhibitors with affinities for multiple targets. 125 publicly available genomes of mpox virus were mined to identify 69 highly conserved proteins. These proteins were then curated manually. These curated proteins were funnelled through a subtractive proteomics pipeline to identify 4 highly druggable, non-host homologous targets namely; A20R, I7L, Top1B and VETFS. High-throughput virtual screening of 5893 highly curated approved/investigational drugs led to the identification of common as well as unique potential inhibitors with high binding affinities. The common inhibitors, i.e., batefenterol, burixafor and eluxadoline were further validated by molecular dynamics simulation to identify their best potential binding modes. The affinity of these inhibitors suggests their repurposing potential. This work can encourage further experimental validation for possible therapeutic management of mpox.

Для цитирования: Sahu Anshuman, Gaur Mahendra, Mahanandia Nimai Charan, Subudhi Enketeswara, Swain Ranjit Prasad, Subudhi Bharat Bhusan. Identification of core therapeutic targets for Monkeypox virus and repurposing potential of drugs against them: An in silico approach.. Computers in biology and medicine. 2023. DOI: 10.1016/j.compbiomed.2023.106971.

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