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bioRxiv : the preprint server for biology · 2025

Assigning Targetable Molecular Pathways to Transdiagnostic Subgroups Across Autism and Related Neurodevelopmental Disorders.

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Ellegood Jacob, Beauchamp Antoine, Yee Yohan, Devenyi Gabe, Ziolkowski Justine, Qiu Lily, Askalan Rand, Ayub Muhammad, Suetterlin Philipp, Donovan Alex, Basson M Albert, Quesnel Katherine M, Berube Nathalie G, Woo Taeseon, Beversdorf David, Bjornsson Hans, Blakely Randy, Crawley Jacqueline, Crosbie Jennifer, Orr Brian O, Davis Graeme W, Genestine Matthew, DiCicco-Bloom Emanuel, Egan Sean, Fink Kyle D, Asbury Sarah, Lai Jonathan, Rilett Kelly, Foster Jane A, Vincent John B, Frankland Paul, Georgiades Stelios, Penagarikano Olga, Geschwind Daniel, Giger Roman J, Markx Sander, Gogos Joseph, Golzio Christelle, Pagani Marco, Gozzi Alessandro, Pacey Laura K, Hampson David, Huang Tzyy-Nan, Yen Tzu-Li, Hsueh Yi-Ping, Iaboni Alana, Amar Megha, Iakoucheva Lilia M, Jones Jessica K, Kelly Elizabeth, Kieffer Brigette, Bae Mihyun, Jung Hwajin, Kim Hyosang, Park Haram, Roh Junye Daniel, Kim Eunjoon, Konopka Genevieve, Laliberte Christine, Lefebvre Julie L, Eagleson Kathie, Levitt Pat, Bach Aurea Martins, Cunningham Thomas J, Fisher Elizabeth, Miller Karla, Mills Alea, Muotri Alyson, Nicolson Rob, Noakes Leigh Spencer, Nieman Brian J, Canales Cesar P, Nord Alex S, Nutter Lauryl Mj, Tam Elaine, Osborne Lucy R, Clipperton-Allen Amy, Page Damon, Babineau Brooke, Palmer Theo D, Yan Keqin, Picketts David, Xia Qiangqiang, Powell Craig M, Raznahan Armin, Robins Diane M, Rumbaugh Gavin, Sengar Ameet S, Salter Michael William, Schachar Russell James, D'Abate Lia, Bradley Clarissa A, Scherer Stephen W, Copping Nycole W, Petkova Stela P, Silverman Jill L, Singh Karun Kar, Kim Nam-Shik, Yoon Ki-Jun Kar, Ming Guo-Li, Song Hongjun, Spring Shoshana, Nakatani Jin, Nakai Nobuhiro, Nomura J, Takumi Toru, Taylor Margot, Tsai Peter, Bruce Matthew, Jones Karen L, Van de Water Judy, Van Eede Matthijs C, Kerr Travis M, Muller Christopher L, VanderWeele Jeremy Veenstra, Vandewouw Marlee, Weksberg Rosanna, Wevrick Rachel, Belinson Haim, Wynshaw-Boris Anthony, Zarbalis Konstantinos, Trost Brett, Mars Rogier B, Chakravarty Mallar, Kushki Azadek, Anagnostou Evdokia, Lerch Jason P

Аннотация

Significant genetic, behavioural and neuroanatomic heterogeneity is common in autism spectrum- and related- neurodevelopmental disorders (NDDs). This heterogeneity constrains the development of effective therapies for diverse patients in precision medicine paradigms. This has led to the search for subgroups of individuals having common etiologic factors/biology (e.g., genetic pathways), thus creating potential uniformity in prognosis and/or treatment response. Despite NDDs having a strong genetic component, only ~15-20% of individuals will present with a specific rare genetic variant considered clinically pathogenic, and therefore, subtyping efforts tend to focus on using clinical, cognitive, and/or brain imaging phenotypes to group individuals. Here we delineated mechanisms via mouse to human translational neuroscience. Using MRI derived structural neuroanatomy and a spatial transcriptomic comparison, we linked subgroups of 135 NDD relevant mouse models (3,515 individual mice) separately to two human databases, with 1,234 and 1,015 human individuals with NDDs, composed of autism, attention-deficit/hyperactivity disorder (ADHD), obsessive compulsive disorder (OCD), other related NDDs, and typically developing controls. Subgroups were significantly linked by consistent neuroanatomy across all three datasets, mouse and human, indicating that direct cross-species subgrouping and translation is consistent and reproducible. Ultimately, four specific neuroanatomical clusters were found and linked to precise molecular mechanisms: two showing a chromatin/transcription motif, with one of those showing specific links to G-protein coupled receptors (GPCR) and Notch signalling, and another two being mainly synaptic in origin, with one off those showing specific connections to axon guidance and Wnt signaling. Assigning molecular pathways, and thus genetic information, from the mouse to individual participants provides an insight into undetected and/or related genetic variants that could be working in combination or interacting with an environmental influence. Moreover, the subgroups found are transdiagnostic, including participants with autism, ADHD, and OCD, which indicates that NDDs as a whole can be subdivided into consistent neuroanatomical clusters with cohesive underlying biological mechanisms. This work allows us to bridge the gap between preclinical models and human disorders, linking previously idiopathic human patients to pertinent genetics, molecular mechanisms, and pathways.