Clinics (Sao Paulo, Brazil) · 2026
Investigation of molecular immune regulation mechanisms and therapeutic target prediction in pancreatic cancer based on bioinformatics and genetics.
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Dong Changjun, Guan Jing, Dong Linhuan, Yu Yunlin, Zhang Xiangwei, Li Zheng, Zhang Xianlin, Mo Chunlin
Аннотация
OBJECTIVE: Pancreatic Cancer (PC) is a highly aggressive malignancy with a dismal prognosis, primarily due to late-stage diagnosis and limited therapeutic options. This study aimed to identify potential biomarkers involved in PC progression and immune microenvironment modulation.
METHODS: RNA sequencing data from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases were integrated to identify differentially expressed genes. Mendelian Randomization (MR) analysis was conducted to assess causal associations between candidate genes and PC risk. Immune cell infiltration was evaluated using the CIBERSORT algorithm, and mediation analysis explored the role of immune cells in PC progression. Validation was performed using RT-qPCR and immunohistochemistry in clinical tissue samples.
RESULTS: CLIC3 and MST1R were significantly overexpressed in PC tissues and associated with advanced tumor stages. MR analysis confirmed their causal relationship with PC, with Odds Ratios of 2.36 (95% CI: 1.58-3.51) for CLIC3 and 1.30 (95% CI: 1.06-1.60) for MST1R. High expression of these genes correlated with increased M0 macrophages and decreased CD8⁺ T cells, CD4⁺ T-cells, and naïve B-cells, suggesting immune dysregulation. Mediation analysis emphasized the pivotal role of CD8⁺ cytotoxic T-cells in PC progression. Moreover, CLIC3 and MST1R were closely associated with immune checkpoint molecules CD276 and NT5E.
CONCLUSIONS: CLIC3 and MST1R are overexpressed and causally implicated in pancreatic cancer development and immune modulation. They represent promising biomarkers and potential therapeutic targets for precision immunotherapy in PC.
METHODS: RNA sequencing data from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases were integrated to identify differentially expressed genes. Mendelian Randomization (MR) analysis was conducted to assess causal associations between candidate genes and PC risk. Immune cell infiltration was evaluated using the CIBERSORT algorithm, and mediation analysis explored the role of immune cells in PC progression. Validation was performed using RT-qPCR and immunohistochemistry in clinical tissue samples.
RESULTS: CLIC3 and MST1R were significantly overexpressed in PC tissues and associated with advanced tumor stages. MR analysis confirmed their causal relationship with PC, with Odds Ratios of 2.36 (95% CI: 1.58-3.51) for CLIC3 and 1.30 (95% CI: 1.06-1.60) for MST1R. High expression of these genes correlated with increased M0 macrophages and decreased CD8⁺ T cells, CD4⁺ T-cells, and naïve B-cells, suggesting immune dysregulation. Mediation analysis emphasized the pivotal role of CD8⁺ cytotoxic T-cells in PC progression. Moreover, CLIC3 and MST1R were closely associated with immune checkpoint molecules CD276 and NT5E.
CONCLUSIONS: CLIC3 and MST1R are overexpressed and causally implicated in pancreatic cancer development and immune modulation. They represent promising biomarkers and potential therapeutic targets for precision immunotherapy in PC.