Journal of global antimicrobial resistance · 2019
Draft genome sequence of broad-spectrum antifungal-producing Bacillus velezensis C4341 isolated from a saline-alkali soil sample in China.
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Zhu Liying, Liu Nian, Wang Haoqi, Zhang Zhidong, Jiang Ling, Huang He
Аннотация
OBJECTIVES: Bacterial micro-organisms from the genus Bacillus have a broad spectrum of antimicrobial activity against plant pathogenic bacteria, fungi and viruses. Bacillus velezensis has been extensively used as a biocontrol agent in the agricultural field. In the present study, B. velezensis strain C4341 was isolated from saline-alkali soil in Xinjiang, China, producing a wide range of antifungal compounds of different structures.
METHODS: The whole genome of B. velezensis C4341 was sequenced using an Illumina HiSeq™ 2000 sequencing system, was assembled using SOAPdenovo and was optimised with GapCloser.
RESULTS: The genome size of strain C4341 was calculated at 3 963 750bp with a G+C content of 46.4%. The whole genome was assembled into 4019 open reading frames (ORFs), of which 5.9% and 1.6% were related to antagonistic secondary metabolites and antimicrobial resistance, respectively.
CONCLUSION: The whole genome sequence of B. velezensis C4341 will be beneficial in comparative analysis of the genus Bacillus and shows future prospects in antifungal application for sustainable agriculture.
METHODS: The whole genome of B. velezensis C4341 was sequenced using an Illumina HiSeq™ 2000 sequencing system, was assembled using SOAPdenovo and was optimised with GapCloser.
RESULTS: The genome size of strain C4341 was calculated at 3 963 750bp with a G+C content of 46.4%. The whole genome was assembled into 4019 open reading frames (ORFs), of which 5.9% and 1.6% were related to antagonistic secondary metabolites and antimicrobial resistance, respectively.
CONCLUSION: The whole genome sequence of B. velezensis C4341 will be beneficial in comparative analysis of the genus Bacillus and shows future prospects in antifungal application for sustainable agriculture.