medRxiv : the preprint server for health sciences · 2023
Human brain single nucleus cell type enrichments in neurodegenerative diseases.
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Alvarado Chelsea X, Weller Cory A, Johnson Nicholas, Leonard Hampton L, Singleton Andrew B, Reed Xylena, Blauewendraat Cornelis, Nalls Mike
Аннотация
Single cell RNA sequencing has opened a window into clarifying the complex underpinnings of disease, particularly in quantifying the relevance of tissue- and cell-type-specific gene expression. To identify the cell types and genes important to therapeutic target development across the neurodegenerative disease spectrum, we leveraged genome-wide association studies, recent single cell sequencing data, and bulk expression studies in a diverse series of brain region tissues. We were able to identify significant immune-related cell types in the brain across three major neurodegenerative diseases: Alzheimer's Disease, Amyotrophic Lateral Sclerosis, and Parkinson's Diseases. Subsequently, we identified the major role of 30 fine-mapped loci implicating seven genes in multiple neurodegenerative diseases and their pathogenesis.