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DOI 10.1093/bib/bbaa285

Медицинская библиотека · Briefings in bioinformatics · 2021

Bioinformatic analysis of SMN1-ACE/ACE2 interactions hinted at a potential protective effect of spinal muscular atrophy against COVID-19-induced lung injury.

Li Zheng, Li Xingye, Shen Jianxiong, Tan Haining, Rong Tianhua, Lin Youxi, Feng Erwei, Chen Zhengguang, Jiao Yang, Liu Gang, Zhang Lin, Vai Chan Matthew Tak, Kei Wu William Ka

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Аннотация

Patients with spinal muscular atrophy (SMA) are susceptible to the respiratory infections and might be at a heightened risk of poor clinical outcomes upon contracting coronavirus disease 2019 (COVID-19). In the face of the COVID-19 pandemic, the potential associations of SMA with the susceptibility to and prognostication of COVID-19 need to be clarified. We documented an SMA case who contracted COVID-19 but only developed mild-to-moderate clinical and radiological manifestations of pneumonia, which were relieved by a combined antiviral and supportive treatment. We then reviewed a cohort of patients with SMA who had been living in the Hubei province since November 2019, among which the only 1 out of 56 was diagnosed with COVID-19 (1.79%, 1/56). Bioinformatic analysis was carried out to delineate the potential genetic crosstalk between SMN1 (mutation of which leads to SMA) and COVID-19/lung injury-associated pathways. Protein-protein interaction analysis by STRING suggested that loss-of-function of SMN1 might modulate COVID-19 pathogenesis through CFTR, CXCL8, TNF and ACE. Expression quantitative trait loci analysis also revealed a link between SMN1 and ACE2, despite low-confidence protein-protein interactions as suggested by STRING. This bioinformatic analysis could give hint on why SMA might not necessarily lead to poor outcomes in patients with COVID-19.

Для цитирования: Li Zheng, Li Xingye, Shen Jianxiong, Tan Haining, Rong Tianhua, Lin Youxi, Feng Erwei, Chen Zhengguang, Jiao Yang, Liu Gang, Zhang Lin, Vai Chan Matthew Tak, Kei Wu William Ka. Bioinformatic analysis of SMN1-ACE/ACE2 interactions hinted at a potential protective effect of spinal muscular atrophy against COVID-19-induced lung injury.. Briefings in bioinformatics. 2021. DOI: 10.1093/bib/bbaa285.

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