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DOI 10.1038/s41531-023-00472-6

Медицинская библиотека · NPJ Parkinson's disease · 2023

The IPDGC/GP2 Hackathon - an open science event for training in data science, genomics, and collaboration using Parkinson's disease data.

Leonard Hampton L, Murtadha Ruqaya, Martinez-Carrasco Alejandro, Jama Alina, Müller-Nedebock Amica Corda, Gil-Martinez Ana-Luisa, Illarionova Anastasia, Moore Anni, Bustos Bernabe I, Jadhav Bharati, Huxford Brook, Storm Catherine, Towns Clodagh, Vitale Dan, Chetty Devina, Yu Eric, Grenn Francis P, Salazar Gabriela, Rateau Geoffrey, Iwaki Hirotaka, Elsayed Inas, Foote Isabelle Francesca, Jansen van Rensburg Zuné, Kim Jonggeol Jeff, Yuan Jie, Lake Julie, Brolin Kajsa, Senkevich Konstantin, Wu Lesley, Tan Manuela M X, Periñán María Teresa, Makarious Mary B, Ta Michael, Pillay Nikita Simone, Betancor Oswaldo Lorenzo, Reyes-Pérez Paula R, Alvarez Jerez Pilar, Saini Prabhjyot, Al-Ouran Rami, Sivakumar Ramiya, Real Raquel, Reynolds Regina H, Hu Ruifneg, Abrahams Shameemah, Rao Shilpa C, Antar Tarek, Leal Thiago Peixoto, Iankova Vassilena, Scotton William J, Song Yeajin, Singleton Andrew, Nalls Mike A, Dey Sumit, Bandres-Ciga Sara, Blauwendraat Cornelis, Noyce Alastair J, on behalf of The International Parkinson Disease Genomics Consortium (IPDGC) and The Global Parkinson’s Genetics Program (GP2)

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Аннотация

Open science and collaboration are necessary to facilitate the advancement of Parkinson's disease (PD) research. Hackathons are collaborative events that bring together people with different skill sets and backgrounds to generate resources and creative solutions to problems. These events can be used as training and networking opportunities, thus we coordinated a virtual 3-day hackathon event, during which 49 early-career scientists from 12 countries built tools and pipelines with a focus on PD. Resources were created with the goal of helping scientists accelerate their own research by having access to the necessary code and tools. Each team was allocated one of nine different projects, each with a different goal. These included developing post-genome-wide association studies (GWAS) analysis pipelines, downstream analysis of genetic variation pipelines, and various visualization tools. Hackathons are a valuable approach to inspire creative thinking, supplement training in data science, and foster collaborative scientific relationships, which are foundational practices for early-career researchers. The resources generated can be used to accelerate research on the genetics of PD.

Для цитирования: Leonard Hampton L, Murtadha Ruqaya, Martinez-Carrasco Alejandro, Jama Alina, Müller-Nedebock Amica Corda, Gil-Martinez Ana-Luisa, Illarionova Anastasia, Moore Anni, Bustos Bernabe I, Jadhav Bharati, Huxford Brook, Storm Catherine, Towns Clodagh, Vitale Dan, Chetty Devina, Yu Eric, Grenn Francis P, Salazar Gabriela, Rateau Geoffrey, Iwaki Hirotaka, Elsayed Inas, Foote Isabelle Francesca, Jansen van Rensburg Zuné, Kim Jonggeol Jeff, Yuan Jie, Lake Julie, Brolin Kajsa, Senkevich Konstantin, Wu Lesley, Tan Manuela M X, Periñán María Teresa, Makarious Mary B, Ta Michael, Pillay Nikita Simone, Betancor Oswaldo Lorenzo, Reyes-Pérez Paula R, Alvarez Jerez Pilar, Saini Prabhjyot, Al-Ouran Rami, Sivakumar Ramiya, Real Raquel, Reynolds Regina H, Hu Ruifneg, Abrahams Shameemah, Rao Shilpa C, Antar Tarek, Leal Thiago Peixoto, Iankova Vassilena, Scotton William J, Song Yeajin, Singleton Andrew, Nalls Mike A, Dey Sumit, Bandres-Ciga Sara, Blauwendraat Cornelis, Noyce Alastair J, on behalf of The International Parkinson Disease Genomics Consortium (IPDGC) and The Global Parkinson’s Genetics Program (GP2). The IPDGC/GP2 Hackathon - an open science event for training in data science, genomics, and collaboration using Parkinson's disease data.. NPJ Parkinson's disease. 2023. DOI: 10.1038/s41531-023-00472-6.
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