DNA sequence : the journal of DNA sequencing and mapping · 2007
Verification and tissue-specific expression of nifU-like gene from the amphioxus Branchiostoma belcheri.
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Li Lei, Zhang Shicui, Fan Chunxin, Liu Zhenhui, Luan Jing
Аннотация
A nifU-like gene exhibiting similarity to nifU of nitrogen fixation gene cluster was identified for the first time from the gut cDNA library of amphioxus Branchiostoma belcheri. Both RT-PCR and Northern blotting as well as in situ hybridization histochemistry verified that the cDNA represents an amphioxus nifU-like gene rather than a microbial contaminant. The nifU-like gene encodes a protein of 164 amino acid residues including a highly-conserved U-type motif (C-X(26)-C-X(43)-C), and shares 66-86% identity to NifU-like proteins from a variety of species including vertebrates, invertebrates and microbes. It is expressed in a tissue-specific manner in the digestive system including epipharyngeal groove, endostyle, hepatic caecum and hindgut and in the gill, ovary and testis. Taken together, it is highly likely that NifU-like protein plays some tissue-dependent and critical role in amphioxus.
Предметные рубрики MeSH
5' Untranslated RegionsAmino Acid MotifsAmino Acid SequenceAnimalsBase SequenceChordata, NonvertebrateCloning, MolecularCluster AnalysisCodon, InitiatorCodon, TerminatorConserved SequenceDNA, ComplementaryGene ExpressionHistocytochemistryIn Situ HybridizationIsoelectric PointMolecular Sequence DataMolecular WeightMultigene FamilyNitrogen FixationOrgan SpecificityPhylogenyProteinsReverse Transcriptase Polymerase Chain ReactionSequence Analysis, DNASequence Homology, Amino AcidTissue Distribution