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DOI 10.1186/s12864-023-09782-8

Медицинская библиотека · BMC genomics · 2023

Identification of ferroptosis-related genes in acute phase of temporal lobe epilepsy based on bioinformatic analysis.

Chen Shihao, Jin Xing, He Tao, Zhang Mulan, Xu Huiqin

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Аннотация

BACKGROUND

Epilepsy is a prevalent neurological disorder, and while its precise mechanism remains elusive, a connection to ferroptosis has been established. This study investigates the potential clinical diagnostic significance of ferroptosis-related genes (FRGs) during the acute phase of temporal lobe epilepsy.

METHODS

To identify differentially expressed genes (DEGs), we accessed data from the GEO database and performed an intersection analysis with the FerrDB database to pinpoint FRGs. A protein-protein interaction (PPI) network was constructed. To assess the diagnostic utility of the discovered feature genes for the disease, ROC curve analysis was conducted. Subsequently, qRT-PCR was employed to validate the expression levels of these feature genes.

RESULTS

This study identified a total of 25 FRGs. PPI network analysis revealed six feature genes: IL6, PTGS2, HMOX1, NFE2L2, TLR4, and JUN. ROC curve analysis demonstrated that the combination of these six feature genes exhibited the highest diagnostic potential. qRT-PCR validation confirmed the expression of these feature genes.

CONCLUSION

We have identified six feature genes (IL6, PTGS2, HMOX1, NFE2L2, TLR4, and JUN) strongly associated with ferroptosis in epilepsy, suggesting their potential as biomarkers for the diagnosis of temporal lobe epilepsy.

Для цитирования: Chen Shihao, Jin Xing, He Tao, Zhang Mulan, Xu Huiqin. Identification of ferroptosis-related genes in acute phase of temporal lobe epilepsy based on bioinformatic analysis.. BMC genomics. 2023. DOI: 10.1186/s12864-023-09782-8.

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