Scientific reports · 2016
Targeted next-generation sequencing reveals multiple deleterious variants in OPLL-associated genes.
СтатьяПоддержка исследования: вне правительства СШАНазвание и аннотация: Перевод в очереди
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Chen Xin, Guo Jun, Cai Tao, Zhang Fengshan, Pan Shengfa, Zhang Li, Wang Shaobo, Zhou Feifei, Diao Yinze, Zhao Yanbin, Chen Zhen, Liu Xiaoguang, Chen Zhongqiang, Liu Zhongjun, Sun Yu, Du Jie
Аннотация
Ossification of the posterior longitudinal ligament of the spine (OPLL), which is characterized by ectopic bone formation in the spinal ligaments, can cause spinal-cord compression. To date, at least 11 susceptibility genes have been genetically linked to OPLL. In order to identify potential deleterious alleles in these OPLL-associated genes, we designed a capture array encompassing all coding regions of the target genes for next-generation sequencing (NGS) in a cohort of 55 unrelated patients with OPLL. By bioinformatics analyses, we successfully identified three novel and five extremely rare variants (MAF < 0.005). These variants were predicted to be deleterious by commonly used various algorithms, thereby resulting in missense mutations in four OPLL-associated genes (i.e., COL6A1, COL11A2, FGFR1, and BMP2). Furthermore, potential effects of the patient with p.Q89E of BMP2 were confirmed by a markedly increased BMP2 level in peripheral blood samples. Notably, seven of the variants were found to be associated with the patients with continuous subtype changes by cervical spinal radiological analyses. Taken together, our findings revealed for the first time that deleterious coding variants of the four OPLL-associated genes are potentially pathogenic in the patients with OPLL.
Предметные рубрики MeSH
AdultAgedBone Morphogenetic Protein 2Cohort StudiesCollagen Type VICollagen Type XIComputational BiologyFemaleGene ExpressionGenetic Association StudiesGenetic Predisposition to DiseaseHigh-Throughput Nucleotide SequencingHumansLongitudinal LigamentsMagnetic Resonance ImagingMaleMiddle AgedMutation, MissenseOssification of Posterior Longitudinal LigamentReceptor, Fibroblast Growth Factor, Type 1SpineTomography, X-Ray Computed