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Journal of molecular modeling · 2025

Stereochemical determination of hydroxylated derivatives of progesterone using DFT NMR calculations and DP4+ probability.

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Rambo Cassia R, Paula Samuel F C, Porto André L M, Rosset Isac G

Аннотация

CONTEXT: Hydroxylated derivatives of progesterone are biologically relevant compounds obtained through regio- and stereoselective biotransformations, but determining their stereochemical configuration is challenging due to subtle NMR chemical shift differences. In this study, monohydroxylated (prog-15-OH) and dihydroxylated (prog-7,15-di-OH) progesterone derivatives produced by Penicillium oxalicum CBMAI 1996 were analyzed. Quantum NMR calculations combined with statistical validation allowed the unambiguous identification of the 15β-OH and 7β,15β-di-OH isomers, with DP4+ probabilities of 100% and 99.8%, respectively. These findings confirm the stereochemical outcome of enzymatic hydroxylation and demonstrate the reliability of integrating computational NMR with experimental spectroscopy for resolving stereochemical ambiguities in complex steroidal frameworks.

METHODS: Conformational searches were performed using the MMFF94 force field, followed by DFT geometry optimizations at the B3LYP/6-311G(2d,p) level with IEFPCM (chloroform). NMR shielding tensors were computed by the GIAO method at the mPW1PW91/6-311G(d,p) level with PCM (chloroform), and chemical shifts were referenced to TMS. Experimental and calculated 1H/13C shifts were compared using correlation coefficients (R2), mean absolute deviation (MAD), root mean square deviation (RMSD), and DP4+ probability analysis. All calculations were performed with Gaussian 16.

Предметные рубрики MeSH

ИП Урсолов Владлен Сергеевич

ИНН 500118482352 · ОГРНИП 314500117700049

Реквизиты и контакты