Ring-opening photoreactions of cytosine and 5-methylcytosine with aliphatic alcohols.

Several reports in the late 1950s and early 1960s indicated that ultraviolet irradiation of dilute solutions of cytosine or 5-methylcytosine in aliphatic alcohols, such as methanol or ethanol, leads to reaction mixtures containing products with an absorption maximum around 300 nm. The present work reports the isolation and characterization of the products responsible for this absorption in the photochemical reactions of cytosine and 5-methylcytosine with methanol, ethanol and 2-propanol at concentrations in the neighborhood of 200 microM. Under these conditions the reactions have been shown, in each nucleobase/alcohol system, to give almost exclusively a single type of primary photoproduct; each product shows an absorption maximum in the region of 300 nm. Structural analysis showed the products to be alcohol adducts with an ester linkage at C2 of the ring-opened base and an enamine structure at C6. For example, in the case of the reaction of cytosine with methanol, the product is N-carbomethoxy-3-aminoacrylamidine (IIIa). The occurrence of this type of photoreaction suggests a mode by which alcoholic functional groups on amino acid side chains could contribute to photoinduced DNA-protein cross-linking.