Recurrent De Novo and Biallelic Variation of ATAD3A, Encoding a Mitochondrial Membrane Protein, Results in Distinct Neurological Syndromes.
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Harel Tamar, Yoon Wan Hee, Garone Caterina, Gu Shen, Coban-Akdemir Zeynep, Eldomery Mohammad K, Posey Jennifer E, Jhangiani Shalini N, Rosenfeld Jill A, Cho Megan T, Fox Stephanie, Withers Marjorie, Brooks Stephanie M, Chiang Theodore, Duraine Lita, Erdin Serkan, Yuan Bo, Shao Yunru, Moussallem Elie, Lamperti Costanza, Donati Maria A, Smith Joshua D, McLaughlin Heather M, Eng Christine M, Walkiewicz Magdalena, Xia Fan, Pippucci Tommaso, Magini Pamela, Seri Marco, Zeviani Massimo, Hirano Michio, Hunter Jill V, Srour Myriam, Zanigni Stefano, Lewis Richard Alan, Muzny Donna M, Lotze Timothy E, Boerwinkle Eric, Baylor-Hopkins Center for Mendelian Genomics, University of Washington Center for Mendelian Genomics, Gibbs Richard A, Hickey Scott E, Graham Brett H, Yang Yaping, Buhas Daniela, Martin Donna M, Potocki Lorraine, Graziano Claudio, Bellen Hugo J, Lupski James R
Аннотация
ATPase family AAA-domain containing protein 3A (ATAD3A) is a nuclear-encoded mitochondrial membrane protein implicated in mitochondrial dynamics, nucleoid organization, protein translation, cell growth, and cholesterol metabolism. We identified a recurrent de novo ATAD3A c.1582C>T (p.Arg528Trp) variant by whole-exome sequencing (WES) in five unrelated individuals with a core phenotype of global developmental delay, hypotonia, optic atrophy, axonal neuropathy, and hypertrophic cardiomyopathy. We also describe two families with biallelic variants in ATAD3A, including a homozygous variant in two siblings, and biallelic ATAD3A deletions mediated by nonallelic homologous recombination (NAHR) between ATAD3A and gene family members ATAD3B and ATAD3C. Tissue-specific overexpression of borR534W, the Drosophila mutation homologous to the human c.1582C>T (p.Arg528Trp) variant, resulted in a dramatic decrease in mitochondrial content, aberrant mitochondrial morphology, and increased autophagy. Homozygous null bor larvae showed a significant decrease of mitochondria, while overexpression of borWT resulted in larger, elongated mitochondria. Finally, fibroblasts of an affected individual exhibited increased mitophagy. We conclude that the p.Arg528Trp variant functions through a dominant-negative mechanism that results in small mitochondria that trigger mitophagy, resulting in a reduction in mitochondrial content. ATAD3A variation represents an additional link between mitochondrial dynamics and recognizable neurological syndromes, as seen with MFN2, OPA1, DNM1L, and STAT2 mutations.